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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922437.1_cds_XP_016471207.1_63575
CDS Infomation

[gene=LOC107793380] [db_xref=GeneID:107793380] [protein=carbamoyl-phosphate synthase small chain, chloroplastic-like] [protein_id=XP_016471207.1] [location=complement(join(54604..54653,55117..55282,55520..55867,55951..56060,56150..56278,56376..56443,56522..56582,56661..56749,57007..57139,58382..58526))] [gbkey=CDS]
Sequence

ATGGATTGTTCGATTAGGATTCAGAATCCGTTGTCCACCACGACAATAACCAGCGCATTG
TTTTCTAATAAAAAGTCTGCAAATTTTAGGGTTTTCACCGTTGGATGTTCTTCTAAAATC
CTTTCCTCTGATGGTGCACCATCTGGTCTGGTTGAAAGACCATGGAAGGTAGCAGATGCT
AGACTTGTTCTCGAGGATGGTTCAATTTGGAAGGCCAAATCATTTGGTGCTTCTGGAACC
CAAGTTGGAGAAGTTGTTTTTAATACATCCTTAACTGGGTATCAGGAGATCCTTACTGAT
CCCAGTTATGCAGGCCAGTTTGTCTTGATGACGAACCCTCATATCGGGAATACTGGGGTC
AATTTTGGCGATGAAGAATCGATGCAGTGCTTTCTTGCAGGATTAGTCATTAGAAGTTTA
AGCATCAGCACCTCAAATTGGAGATGCAAAGAGACACTTGATGAGTATTTGGCTAAAAGG
AACATCATGGGTATATATGATGTAGACACTCGCGCAATTACGCGAAGATTGAGACAAGAC
GGAAGCCTCATTGGAGTCCTGAGCACGGAAAATTCAAAAACTGATGAAGAACTTCTCGAA
ATGTCTCGTACATGGGACATTGTGGGTGTGGATTTAATCAGTGGTGTTTCATGCAAATCT
CCTTATGAATGGGTTGATAGAACAGCCTCAGATTGGGATTTTAATGATAATGGAAGAAAT
AAAGAAACTTTTAATGTTGTTGCATATGATTTTGGAATCAAGCATAATATACTTCGGCGC
TTAGCATCCTATGGCTGTAAAATCACTGTTGTTCCTTCAACATGGCCAGCGTCTGAAACT
CTAAAGATGAAACCCGATGGGGTTCTCTTCAGCAATGGGCCAGGAGATCCCTCTGCAGTT
CCCTATGCAGTTGAAGCGGTAAAAGAACTTATTGGAAAAATTCCTGTTTTTGGCATTTGT
ATGGGTCACCAGTTACTTGGTCAAGCATTGGGGGGTAAGACATTCAAAATGAAATTTGGT
CATCATGGAGGAAACCATCCTGTTCGAAACCTTCGAAATGGCTGCGTCGAGATCAGTGCT
CAGAATCACAACTACGCTGTTGACCCTGAGTCTCTTCCAGAAGGTGTAGAGGTGACTCAT
GTAAATTTAAATGATGGAAGCTGTGCTGGTCTTGCCTCCTTTAAAATGAAGCTGATGTCA
CTTCAATACCATCCCGAAGCATCTCCAGGACCTCATGATTCAGATCCTGTATTCGGGGAA
TTTATACAACTCATGAAGCAAGAAAAAGTGAAGGCATAA

Peptide Sequence

PEP ID

XP_016471207.1
PEP Infomation

PREDICTED: carbamoyl-phosphate synthase small chain, chloroplastic-like [Nicotiana tabacum]
Sequence

MDCSIRIQNPLSTTTITSALFSNKKSANFRVFTVGCSSKILSSDGAPSGLVERPWKVADA
RLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
NFGDEESMQCFLAGLVIRSLSISTSNWRCKETLDEYLAKRNIMGIYDVDTRAITRRLRQD
GSLIGVLSTENSKTDEELLEMSRTWDIVGVDLISGVSCKSPYEWVDRTASDWDFNDNGRN
KETFNVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSNGPGDPSAV
PYAVEAVKELIGKIPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNLRNGCVEISA
QNHNYAVDPESLPEGVEVTHVNLNDGSCAGLASFKMKLMSLQYHPEASPGPHDSDPVFGE
FIQLMKQEKVKA

Transcript Sequence

Gene sequence data has not been registered.